• Pardo E., González G., Tucker-Schwartz J., Dave S.R., Malpica N. H-EM: an algorithm for simultaneous cell diameter and intensity quantification in low-resolution imaging cytometry. PLOS ONE, 14(9):e0222265, 2019.
  • Benito‐León J., Sanz‐Morales E., Melero H., Louis E.D., Romero J. P., Rocon E., Malpica N. Graph theory analysis of resting‐state functional magnetic resonance imaging in essential tremor. Human brain mapping. In press, 2019.
  • Pardo E., Garfias C., Malpica N. Seismic Phase Picking Using Convolutional Networks. IEEE Transactions on Geoscience and Remote Sensing, 57(9), 7086 – 7092, 2019.
  • Vera-Olmos F.J., Pardo E., Melero H. Malpica, N. DeepEye: Deep convolutional network for pupil detection in real environments. Integrated Computer-Aided Engineering, 26(1), 85-95, 2019.
  • Torrado-Carvajal A., Vera-Olmos J., Izquierdo-Garcia D., Catalano O.A., Morales M.A., Margolin J., Soricelli A., Salvatore M., Malpica N., Catana C. Dixon-VIBE Deep Learning (DIVIDE) Pseudo-CT Synthesis for Pelvis PET/MR Attenuation Correction. Journal of Nuclear Medicine, 60(3), 429-435, 2019.
  • Torrado-Carvajal A., Eryaman Y., Turk E.A., Herraiz J.L., Hernandez-Tamames J.A., Adalsteinsson E., Wald E., Malpica N. Computer-Vision Techniques for Water-Fat Separation in Ultra-High Field MRI Local Specific Absorption Rate Estimation. IEEE Transactions on Biomedical Engineering, 66(3), 768-774, 2019.


  • Aladro Y, López-Alvarez L, Sánchez-Reyes JM, Hernández-Tamames JA, Melero H, Rubio-Fernández S, Thuissard I, Cerezo-García M. Relationship between episodic memory and volume of the brain regions of two functional cortical memory systems  in multiple sclerosis. J Neurol. 2018 Jul 11.
  • Pardo E, Morgado JMT, Malpica N. Semantic segmentation of mFISH images using convolutional networks. Cytometry A. 2018 Jun;93(6):620-62
  • Cristobal-Huerta A, Poot DHJ, Vogel MW, Krestin GP, Hernandez-Tamames JA. K-space trajectories in 3D-GRASE sequence for high resolution structural imaging. Magn Reson Imaging. 2018 May;48:10-19. doi: 10.1016/j.mri.2017.12.003. Epub 2017  Dec 8. PubMed PMID: 29225108.


  • Luo J, Abaci Turk E, Bibbo C, Gagoski B, Roberts DJ, Vangel M, Tempany-Afdhal CM, Barnewolt C, Estroff J, Palanisamy A, Barth WH, Zera C, Malpica N, Golland P, Adalsteinsson E, Robinson JN, Grant PE. In Vivo Quantification of Placental insufficiency by BOLD MRI: A Human Study. Sci Rep. 2017 Jun 16;7(1):3713.
  • Turk EA, Luo J, Gagoski B, Pascau J, Bibbo C, Robinson JN, Grant PE, Adalsteinsson E, Golland P, Malpica N. Spatiotemporal alignment of in utero BOLD-MRI series. J Magn Reson Imaging. 2017 Aug;46(2):403-412.


  • Benito-León J, Louis ED, Mato-Abad V, Dydak U, Álvarez-Linera J, Hernández-Tamames JA, Molina-Arjona JA, Malpica N, Matarazzo M, Romero JP, Sánchez-Ferro Á. In vivo neurometabolic profiling in orthostatic tremor. Medicine (Baltimore). 2016 Sep;95(37):e4848.
  • Benito-León J, Louis ED, Manzanedo E, Hernández-Tamames JA, Álvarez-Linera J,
  • Molina-Arjona JA, Matarazzo M, Romero JP, Domínguez-González C, Domingo-Santos Á, Sánchez-Ferro Á. Resting state functional MRI reveals abnormal network connectivity in orthostatic tremor. Medicine (Baltimore). 2016 Jul;95(29):e4310.  
  • Agüera-Ortiz L, Hernandez-Tamames JA, Martinez-Martin P, Cruz-Orduña I, Pajares G, López-Alvarez J, Osorio RS, Sanz M, Olazarán J. Structural correlates  of apathy in Alzheimer’s disease: a multimodal MRI study. Int J Geriatr Psychiatry. 2017 Aug;32(8):922-930. doi: 10.1002/gps.4548. Epub 2016 Jul 18.
  • Lopez-Garcia P, Cristobal-Huerta A, Young Espinoza L, Molero P, Ortuño Sanchez-Pedreño F, Hernández-Tamames JA. The influence of the COMT genotype in the underlying functional brain activity of context processing in schizophrenia and in relatives. Prog Neuropsychopharmacol Biol Psychiatry. 2016 Nov 3;71:176-82. 27421706.
  • Labiano-Fontcuberta A, Mato-Abad V, Álvarez-Linera J, Hernández-Tamames JA, Martínez-Ginés ML, Aladro Y, Ayuso L, Domingo-Santos Á, Benito-León J. Normal-appearing brain tissue analysis in radiologically isolated syndrome using  3 T MRI. Medicine (Baltimore). 2016 Jul;95(27)
  • Labiano-Fontcuberta A, Mato-Abad V, Álvarez-Linera J, Hernández-Tamames JA, Martínez-Ginés ML, Aladro Y, Ayuso L, Domingo-Santos Á, Benito-León J. Gray Matter Involvement in Radiologically Isolated Syndrome. Medicine (Baltimore). 2016 Mar;95(13):e3208.
  • Mato Abad V, García-Polo P, O’Daly O, Hernández-Tamames JA, Zelaya F. ASAP (Automatic Software for ASL Processing): A toolbox for processing Arterial Spin  Labeling images. Magn Reson Imaging. 2016 Apr;34(3):334-44.
  • Garcés P, Pereda E, Hernández-Tamames JA, Del-Pozo F, Maestú F, Pineda-Pardo  JÁ. Multimodal description of whole brain connectivity: A comparison of resting state MEG, fMRI, and DWI. Hum Brain Mapp. 2016 Jan;37(1):20-34.
  • Torrado-Carvajal A, Herraiz JL, Alcain E, Montemayor AS, Garcia-Cañamaque L,  Hernandez-Tamames JA, Rozenholc Y, Malpica N. Fast Patch-Based Pseudo-CT Synthesis from T1-Weighted MR Images for PET/MR Attenuation Correction in Brain Studies. J Nucl Med. 2016 Jan;57(1):136-43.
  • Solana AB, Martínez K, Hernández-Tamames JA, San Antonio-Arce V, Toledano R,  García-Morales I, Alvárez-Linera J, Gil-Nágel A, Del Pozo F. Altered brain rhythms and functional network disruptions involved in patients with generalized fixation-off epilepsy. Brain Imaging Behav. 2016 Jun;10(2):373-86.
  • Hernández-Tamames JA, Mato Abad V, García-Álvarez R, González-Zabaleta J, Pereira Loureiro J, Álvarez-Linera J. Effect of Water T2 Shortening in the Quantification of in-vitro Proton MR Spectroscopy. J Neuroimaging. 2016 Jan-Feb;26(1):58-61.
  • Torrado-Carvajal A, Herraiz JL, Hernandez-Tamames JA, San Jose-Estepar R, Eryaman Y, Rozenholc Y, Adalsteinsson E, Wald LL, Malpica N. Multi-atlas and label fusion approach for patient-specific MRI based skull estimation. Magn Reson Med. 2016 Apr;75(4):1797-807.
  • Benito-León J, Louis ED, Romero JP, Hernández-Tamames JA, Manzanedo E, Álvarez-Linera J, Bermejo-Pareja F, Posada I, Rocon E. Altered Functional Connectivity in Essential Tremor: A Resting-State fMRI Study. Medicine (Baltimore). 2015 Dec;94(49):e1936.
  • Olazarán J, Valentí M, Frades B, Zea-Sevilla MA, Ávila-Villanueva M, Fernández-Blázquez MÁ, Calero M, Dobato JL, Hernández-Tamames JA, León-Salas B, Agüera-Ortiz L, López-Álvarez J, Larrañaga P, Bielza C, Álvarez-Linera J, Martínez-Martín P. The Vallecas Project: A Cohort to Identify Early Markers and Mechanisms of Alzheimer’s Disease. Front Aging Neurosci. 2015 Sep 30;7:181.
  • Grade M, Hernandez Tamames JA, Pizzini FB, Achten E, Golay X, Smits M. A neuroradiologist’s guide to arterial spin labeling MRI in clinical practice. Neuroradiology. 2015 Dec;57(12):1181-202.
  • Pineda-Pardo JÁ, Martínez K, Solana AB, Hernández-Tamames JA, Colom R, del Pozo F. Disparate connectivity for structural and functional networks is revealed when physical location of the connected nodes is considered. Brain Topogr. 2015 Mar;28(2):187-96.
  • Eryaman Y, Guerin B, Akgun C, Herraiz JL, Martin A, Torrado-Carvajal A, Malpica N, Hernandez-Tamames JA, Schiavi E, Adalsteinsson E, Wald LL. Parallel transmit pulse design for patients with deep brain stimulation implants. Magn Reson Med. 2015 May;73(5):1896-903.
  • Eryaman Y, Guerin B, Keil B, Mareyam A, Herraiz JL, Kosior RK, Martin A,Torrado-Carvajal A, Malpica N, Hernandez-Tamames JA, Schiavi E, Adalsteinsson E, Wald LL. SAR reduction in 7T C-spine imaging using a “dark modes” transmit array strategy. Magn Reson Med. 2015 Apr;73(4):1533-9.


  • Valero IP, Baeza AG, Hernandez-Tamames JA, Monge S, Arnalich F, Arribas JR. Cerebral volumes, neuronal integrity and brain inflammation measured by MRI in patients receiving PI monotherapy or triple therapy. J Int AIDS Soc. 2014 Nov 2;17(4 Suppl 3):19578.
  • Martín-Loeches M, Hernández-Tamames JA, Martín A, Urrutia M. Beauty and ugliness in the bodies and faces of others: an fMRI study of person esthetic judgement. Neuroscience. 2014 Sep 26;277:486-97.
  • Mato Abad V, Quirós A, García-Álvarez R, Loureiro JP, Alvarez-Linera J, Frank A, Hernández-Tamames JA. The partial volume effect in the quantification of 1H magnetic resonance spectroscopy in Alzheimer’s disease and aging. J Alzheimers Dis. 2014;42(3):801-11.
  • Solana AB, Hernández-Tamames JA, Manzanedo E, García-Álvarez R, Zelaya FO, del Pozo F. Gradient induced artifacts in simultaneous EEG-fMRI: Effect of synchronization on spiral and EPI k-space trajectories. Magn Reson Imaging. 2014  Jul;32(6):684-92.
  • Pineda-Pardo JA, Garcés P, López ME, Aurtenetxe S, Cuesta P, Marcos A, Montejo P, Yus M, Hernández-Tamames JA, del Pozo F, Becker JT, Maestú F. White matter damage disorganizes brain functional networks in amnestic mild cognitive impairment. Brain Connect. 2014 Jun;4(5):312-22. doi: 10.1089/brain.2013.0208


  • Melero H, Peña-Melián Á, Ríos-Lago M, Pajares G, Hernández-Tamames JA, Álvarez-Linera J. Grapheme-color synesthetes show peculiarities in their emotional brain: cortical and subcortical evidence from VBM analysis of 3D-T1 and DTI data. Exp Brain Res. 2013 Jun;227(3):343-53.
  • Di Deco J, González AM, Díaz J, Mato V, García-Frank D, Álvarez-Linera J, Frank A, Hernández-Tamames JA. Machine learning and social network analysis applied to Alzheimer’s disease biomarkers. Curr Top Med Chem. 2013;13(5):652-62. 
  • Garamendi JF, Gaspar FJ, Malpica N, Schiavi E. Box relaxation schemes in staggered discretizations for the dual formulation of total variation minimization. IEEE Trans Image Process. 2013 May;22(5):2030-43.
  • González de la Aleja J, Ramos A, Mato-Abad V, Martínez-Salio A, Hernández-Tamames JA, Molina JA, Hernández-Gallego J, Alvarez-Linera J. Higher glutamate to glutamine ratios in occipital regions in women with migraine during the interictal state. Headache. 2013 Feb;53(2):365-75.
  • Rueda A, Malpica N, Romero E. Single-image super-resolution of brain MR images using overcomplete dictionaries. Med Image Anal. 2013 Jan;17(1):113-32.
  • Olazarán J, Hernández-Tamames JA, Molina E, García-Polo P, Dobato JL, Álvarez-Linera J, Martínez-Martín P; AD Research Unit Investigators. Clinical and anatomical correlates of gait dysfunction in Alzheimer’s disease. J Alzheimers Dis. 2013;33(2):495-505.
  • Martínez K, Solana AB, Burgaleta M, Hernández-Tamames JA, Alvarez-Linera J, Román FJ, Alfayate E, Privado J, Escorial S, Quiroga MA, Karama S, Bellec P, Colom R. Changes in resting-state functionally connected parietofrontal networks after videogame practice. Hum Brain Mapp. 2013 Dec;34(12):3143-57.


  • Molina V, Martín C, Ballesteros A, de Herrera AG, Hernández-Tamames JA. Optimized voxel brain morphometry: association between brain volumes and the response to atypical antipsychotics. Eur Arch Psychiatry Clin Neurosci. 2011 Sep;261(6):407-16.
  • Molina V, Galindo G, Cortés B, de Herrera AG, Ledo A, Sanz J, Montes C, Hernández-Tamames JA. Different gray matter patterns in chronic schizophrenia and chronic bipolar disorder patients identified using voxel-based morphometry. EurArch Psychiatry Clin Neurosci. 2011 Aug;261(5):313-22.


  • Benito-León J, Alvarez-Linera J, Hernández-Tamames JA, Alonso-Navarro H,Jiménez-Jiménez FJ, Louis ED. Brain structural changes in essential tremor: voxel-based morphometry at 3-Tesla. J Neurol Sci. 2009 Dec 15;287(1-2):138-42.
  • Abella M, Zubeldia JM, Conejero L, Malpica N, Vaquero JJ, Desco M. Automatic  quantification of histological studies in allergic asthma. Cytometry A. 2009


  • Martín-Loeches M, Casado P, Hernández-Tamames JA, Alvarez-Linera J. Brain activation in discourse comprehension: a 3t fMRI study. Neuroimage. 2008 Jun;41(2):614-22.


  • Alvarez-Linera Prado J, Ríos-Lago M, Martín-Alvarez H, Hernández-Tamames JA,  Escribano-Vera J, Sánchez del Río M. [Functional magnetic resonance imaging of the visual cortex: relation between stimulus intensity and bold response]. Rev Neurol. 2007 Aug 1-15;45(3):147-51.
  • Hernandez JA, Acuña CJ, de Castro MV, Marcos E, López M, Malpica N. Web-PACS  for multicenter clinical trials. IEEE Trans Inf Technol Biomed. 2007 Jan;11(1):87-93.


  • Pérez-David E, García-Fernández MA, Ledesma MJ, Malpica N, López Fernández T, Santos A, Moreno M, Antoranz JC, Bermejo J, Desco M. Age-related intramyocardial  patterns in healthy subjects evaluated with Doppler tissue imaging. Eur J Echocardiogr. 2005 Jun;6(3):175-85.


  • Malpica N, Santos A, Zuluaga MA, Ledesma MJ, Pérez E, García-Fernández MA, Desco M. Tracking of regions-of-interest in myocardial contrast echocardiography. Ultrasound Med Biol. 2004 Mar;30(3):303-9.


  • Garcia-Fernandez MA, Bermejo J, Perez-David E, Lopez-Fernandez T, Ledesma MJ, Caso P, Malpica N, Santos A, Moreno M, Desco M. New techniques for the assessment of regional left ventricular wall motion. Echocardiography. 2003 Oct;20(7):659-72.
  • Malpica N, Santos A, Tejedor A, Torres A, Castilla M, García-Barreno P, Desco M. Automatic quantification of viability in epithelial cell cultures by texture analysis. J Microsc. 2003 Jan;209(Pt 1):34-40.


  • Desco M, Ledesma-Carbayo MJ, Pérez E, Santos A, Antoranz JC, Malpica N, Marcos-Alberca P, García-Fernández MA. Assessment of normal and ischaemic myocardium by quantitative M-mode tissue Doppler imaging. Ultrasound Med Biol. 2002 May;28(5):561-9.
  • Marcos-Alberca P, García-Fernández MA, Ledesma MJ, Malpica N, Santos A, Moreno M, Bermejo J, Antoranz JC, Desco M. Intramyocardial analysis of regional systolic and diastolic function in ischemic heart disease with Doppler tissue imaging: role of the different myocardial layers. J Am Soc Echocardiogr. 2002 Feb;15(2):99-108.


  • 58: Gómez EJ, Caballero PJ, Malpica N, del Pozo F. Optimisation and evaluation of an asynchronous transfer mode teleradiology co-operative system: the experience of the EMERALD and the BONAPARTE projects. Comput Methods Programs Biomed. 2001 Mar;64(3):201-14.


  • Gómez EJ, del Pozo F, Ortiz EJ, Malpica N, Rahms H. A broadband multimedia collaborative system for advanced teleradiology and medical imaging diagnosis. IEEE Trans Inf Technol Biomed. 1998 Sep;2(3):146-55.


  • Ruiz-Cabello J, Carrero-González B, Avilés P, Santisteban C, Méndez RJ, Ferreirós J, Malpica N, Santos A, Gargallo-Viola D, Regadera J. Magnetic resonance imaging in the evaluation of inflammatory lesions in muscular and soft  tissues: an experimental infection model induced by Candida albicans. Magn Reson  Imaging. 1999 Nov;17(9):1327-34.


  • Santos A, Ortiz de Solórzano C, Vaquero JJ, Peña JM, Malpica N, del Pozo F. Evaluation of autofocus functions in molecular cytogenetic analysis. J Microsc. 1997 Dec;188(Pt 3):264-72.
  • Malpica N, de Solórzano CO, Vaquero JJ, Santos A, Vallcorba I, García-Sagredo JM, del Pozo F. Applying watershed algorithms to the segmentation of clustered nuclei. Cytometry. 1997 Aug 1;28(4):289-97.